CDS

Accession Number TCMCG009C14437
gbkey CDS
Protein Id XP_030498957.1
Location join(83837678..83837809,83838258..83838610,83838719..83838838,83839057..83839127,83839759..83839829,83839943..83839990,83840089..83840148,83840508..83840568,83840661..83840773,83840907..83841353,83841946..83842102,83842375..83842442,83842556..83842693)
Gene LOC115714405
GeneID 115714405
Organism Cannabis sativa

Protein

Length 612aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA560384
db_source XM_030643097.1
Definition splicing factor U2af large subunit B isoform X2 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor U2af large subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12837        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000243        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGATTACGAAGCTAGATATGACGGTAATGGAGACGACATGGACAGCTACGGTGACGATGGTTCATCTCCACAGCCTCGTGGTAGCAGTCATGGTGTCCCCGAGGATTATATCGACTCTAAATCTCAGCATGGTACGCGAGATTATGAGCGGGAGTCTTCGAAGAGTAGAGAAAAGGAAAGGGATAAAGGGCGTGAAAAAGAGAAAGACAGGGATCGCGAAAGGGATAGGGATAAGGATAGGGATAGAGATAGGGATAGGGATAGAGGGAGAAGCAAGGAGAAAGACAGGGATAGGGATAGGGAAAGAGACCGAGACCGGGACAAAGATAGAGGAAGGGACCGTGATAGGGATAGAGATAGAGACAGAGATCGTGATCGACATCATAGAGATCGCCACAGGGATCGTGGTGAGAGAAGGTCACGTGGCAGAGATAGGGATGATGACGATGATGATTATTACCGCAGTCGAGATTATGATAGACGGAGGGATTATGACAAAGATAGGGAAGATAGGCACAAGGTTCGATCTAGTTCACGCTCAATGGGTAGGTCTGAGCACAGATCTAGGTCAAGGTCGCGTTCTCGTTCACGCTCAAAAAGCAAAAGGATTAGCGGTTTTGATATGGCACCTCCTGCTTCTGCAATGTTAGCTACTGCAGTAGCTGCTACAGGTCAGATTCCTGGGACTCCTCCAGCTATCCCTGGAATGTTTCCAAACATGTTTCCTCTAGCAACTGGCCAGCAATTTGGAGCCCTTCCAGTCATGCCAGTGCAAGCCATGACTCAGCAGGCTACTAGACATGCCCGACGGGTGTACGTTGGTGGGCTTCCTCCTACAGCAAATGAACAGTCTGTTGCAACATTTTTCAGTCAGGTGATGGCTGCAATTGGAGGAAACACTGCTGGTCCAGGAGATGCTGTTGTAAATGTATATATCAACCATGAAAAGAAGTTCGCCTTTGTGGAGATGAGATCTGTTGAGGAGGCCAGTAATGCAATGGCCTTGGATGGGATTATTTTTGAGGGAGCCCCTGTTAAGGTGAGGAGGCCCAGTGATTACAACCCTTCACTTGCTGCAACTCTTGGCCCTAGCCAGCCCAATCCAAATTTGAATCTTGCTGCTGTTGGGCTTACACCAGGTTCTGCTGGTGGGCTTGAGGGTCCTGATCGCATTTTTGTGGGCGGGTTGCCCTATTACTTTACAGAAGCACAAATCAAGGAGTTGCTGGAGTCCTTTGGCCCGCTGCGGGGTTTTGATTTGGTGAAAGATAGAGAAACAGGAAATTCTAAAGGTTATGCCTTTTGTGTTTACCAAGATCTTTCCGTTACAGACATAGCATGTGCTGCTCTGAATGGAATAAAAATGGGTGATAAGACGCTCACTGTTAGACGAGCCAACCAAGGTGCTAGCCAGCCCAAACCCGAACAAGAGAGCGTGTTGTTACATGCACAGCAGCAGATTGCTTTGCAGAGATTTATGTTGTTGCAACAACCTGGTGCTGGGACTGGTGGTGCAGCAGCCTCCAAGGTCATATGCCTTACTCAAGTAGTTACTGCGGATGAGCTAAGAGACGATGAAGAATATGAAGACATTATGGAAGACATGAGACAGGAGGGCGAAAAATTCGGTCCGTTGACAAGAGTAGTTATCCCACGACCTAGGCCGGACGGTGAACCATCCCCTGGAGTAGGCAAGGTATTTCTTGAATATACCGAAATGGAAGGGGCTTCAAAGGCCCGTGCGGGATTAAATGGAAGAAAATTTGGCGGGAATCAAGTAGTGGCGGTGTTCTATCCAGAAAACAAGTTTGCTGAGGGGGATTACGATGCCTAG
Protein:  
MADYEARYDGNGDDMDSYGDDGSSPQPRGSSHGVPEDYIDSKSQHGTRDYERESSKSREKERDKGREKEKDRDRERDRDKDRDRDRDRDRGRSKEKDRDRDRERDRDRDKDRGRDRDRDRDRDRDRDRHHRDRHRDRGERRSRGRDRDDDDDDYYRSRDYDRRRDYDKDREDRHKVRSSSRSMGRSEHRSRSRSRSRSRSKSKRISGFDMAPPASAMLATAVAATGQIPGTPPAIPGMFPNMFPLATGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIKELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQESVLLHAQQQIALQRFMLLQQPGAGTGGAAASKVICLTQVVTADELRDDEEYEDIMEDMRQEGEKFGPLTRVVIPRPRPDGEPSPGVGKVFLEYTEMEGASKARAGLNGRKFGGNQVVAVFYPENKFAEGDYDA